SE2950041

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_41
  • Aquilegia coerulea
  • SE2950041
  • PIF/harbinger
  • To3
  • scaffold_39:622890-623127
  • TTA
  • AGGGCCCGTTCGGCAAGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                  --  CCGAAAATGTATTTCTTAACTTCTCGGAAGGAGAGAAGTTAGAAGTCTGTTCGGCAAAACCCAAAATTAGATTTGGAAAGCAATTTTGATAAGCTA
  AGGGCCCGTTCGGCAAGG  GC                                                                                                
  ||||||||||||||||||  ||                                                                                                 
  TCCCGGGCAAGCCGTTTC  CC                                                                                                
AT                  TT  TCTTCATGGCTTCCTTAAAGGAATTTTCCTCGACAGTTAAACTCTTTACTCTTTCCTCTTTCGATCTAAAATTTTGAATGCCTCTTTAAGGAAAAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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