SE2920069

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_69
  • Aquilegia coerulea
  • SE2920069
  • Mutator
  • M23
  • scaffold_3:2434720-2435004
  • CAAACAAAA
  • GGTCAAATAATCAAAATTGACAACAACGTTTGCAAAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
CAAACAAAAC        A   A                         -TTTC   T  A      C                        CA    A                         ACA  C  A  ---AAA   GT
          GGTCAAAT ATC AAATTGACAACAACGTTTGCAAAAA     AAT AT ATAATG ATTTCAAATATAACACCAACGTTT  TATC TATCAATTCATGACAACTAAGTTTA   CC AC TC      TGG  
          |||||||| ||| |||||||||||||||||||||||||     ||| || |||||| ||||||||||||||||||||||||  |||| |||||||||||||||||||||||||   || || ||      |||   
          CCAGTTTA TAG TTTAACTGTTGTTGCAAATGTTTTT     TTA TA TGTTAC TAAAGTTTATATTGTGGTTGCAAA  ATAG ATAGTTAAGTACTGTTGGTTCAAAT   GG TG AG      ACC  
CAAAACAAAC        A   C                         TTAAA   T  C      A                        CA    C                         CAA  C  -  AAAAAA   AC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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