SE2950072

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_72
  • Aquilegia coerulea
  • SE2950072
  • PIF/harbinger
  • To9
  • scaffold_4:1470563-1470794
  • TAA
  • AGGGCCCGTTCGGCAAGGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TA             C     CCCAATAAT   TTTCTTGTCTTTCTGGAAGTAGGAAAGTGAGAAGTTCGTTCGGTAATCGACCATCAAAAATAAAAAAGGAATTCCCGAAAAGAAGG
  AGGGCCCGTTCGG AAGGG         GCA                                                                                      
  ||||||||||||| |||||         |||                                                                                       
  TCCCGGGCAAGCC TTCTT         TCT                                                                                      
AA             T     ------TCC   TCAAGACTTCCTTAAAGACATCTTCATCCGTCGCTCTCTTCTCTTTCCTCTTTCAATTCCAAATTTTGAAGTCGCTTTACGAAAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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