SE2920075

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_75
  • Aquilegia coerulea
  • SE2920075
  • Mutator
  • M19
  • scaffold_1:8463426-8463674
  • CTTTCTTTC
  • GAGTTTGAATTTGTTCC

Secondary structure and sequence

TSD    TIR
5'



3' 
CTTTCTTTC    T                  C CTCTCCACCAGATTTTGCCACGTACTACTAATTTTTTTTTTTTTTTAATTTAGCTAGTCCCACTAGGGTTAACAGCACCATCTTAGTGTTT
         GAGT TGAATTTGTTCCGAACAA A                                                                                           
         |||| |||||||||||||||||| |                                                                                            
         CTCA GCTTAAACAAGGTGTGAG A                                                                                           
CTTTCTTTC    C                  - AATTCTCACGCCTTGTTATGAGAGGAGGTCTAGAACGGTGCACCGATATAAAAAATAAAAAATTATAATTCATTCTAATTAATTTTTTGAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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