SE2950084

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_84
  • Aquilegia coerulea
  • SE2950084
  • PIF/harbinger
  • To2
  • scaffold_32:1183764-1183979
  • TAA
  • AGGGTCTGTTTGATTCG

Secondary structure and sequence

TSD    TIR
5'



3' 
TA                 AGC    AACTAGTTTACCGGTAAAAATGGAGGACAGTGGATGGAATTAAAAATTTAATGTCGGAGAAGAAGACACCGAAGTCTGAGGG
  AGGGTCTGTTTGATTCG   GGTA                                                                                  
  |||||||||||||||||   ||||                                                                                   
  TCCCAGACAAACTAAGC   CCCT                                                                                  
AA                 CCA    AAGAAAGGGCCATTTAAAGACTCTTCCCGTATATTCATTAACGTGTTTTTATTCTTCTTTTGAGTTACGAGGCTAGTTTTGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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