SE2950085

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_85
  • Aquilegia coerulea
  • SE2950085
  • PIF/harbinger
  • To2
  • scaffold_16:2367122-2367338
  • TAA
  • AGGGTCTGTTTGATTCGGGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA                    -    TTCTTTCCCGGTAAATTTCTGGAGAGGGGCATATGAGTAATTGCACAAAAATTAAGAAGAAAACTCAATGCTCCGTCAAAAC
  AGGGTCTGTTTGATTCGGGT GGGA                                                                                  
  |||||||||||||||||||| ||||                                                                                   
  TCCCAGACAAACTAAGCTCG CATT                                                                                  
AA                    C    TGATCAAATGTCCATTTTTACCTCCTGTCGCCTACCTTTATTTTTAATTAACAGCCTCTTCTTCTGTGGCTTCACTCTCCCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End
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