SE2950094

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_94
  • Aquilegia coerulea
  • SE2950094
  • PIF/harbinger
  • To24
  • scaffold_60:1479300-1479530
  • TTT
  • GGGCCCGTTCGGCAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTT               AGAGG    AAT  A TCCGTAGCTTTCCAAAAGTAAGAAAGCAGGAAGCTTGTTCGATGATTACACAAATTAAATTAAAAAGTAATTCTTAAAAAGTTAAG
   GGGCCCGTTCGGCAA     TGAA   GC T                                                                                      
   |||||||||||||||     ||||   || |                                                                                       
   CTCGGGCAAGCCGTT     GAGT   TT T                                                                                      
TTT               -----    ---  - AAAAAAGCTTCCTTAAAGCAACATTCAACAACAGACCTTATTCTTTCCTGTTTTGAATTTTGTCTTTGAATGGTATTTTACGGAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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