SE2950096

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_96
  • Aquilegia coerulea
  • SE2950096
  • PIF/harbinger
  • To10
  • scaffold_1:1537417-1537652
  • TTA
  • AGGGCCCGTTCGGCAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT    C           CTAAGAC       AGAAGGAATTTTTTTAAAAGCGGCTACGAGACAGGAGAAAGGAGAAAGCTAAGAATTGAAACTTACGTGATAATTCCTTTTCCGACTTA
  AGGG CCGTTCGGCAA       AAAGTTC                                                                                         
  |||| |||||||||||       |||||||                                                                                          
  TCCC GGCAAGCCGTT       CCGGGTC                                                                                         
AT    A           ------A       CTTACATAAAGCTAGAGATGAAGAATTTTCCTTTATTCACCCTTCAGACAAGCCATTTGGTATTTTGGCTTAATCTTTCATTGGTAACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3