SE2950102

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_102
  • Aquilegia coerulea
  • SE2950102
  • PIF/harbinger
  • To23
  • scaffold_30:1808907-1809108
  • TTA
  • AGGGTCTGTTTGATT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT               ------      AAAGTTTCCCGGTAAATTTTTTTTGAGGGGTAAAAGAGTCAAATTGACAAAAGTTATAAGAAAATCTCAAAATTG
  AGGGTCTGTTTGATT      GGGAAA                                                                           
  |||||||||||||||      ||||||                                                                            
  TCCCAGACAAACTAA      CCATTT                                                                           
AT               GTCCGG      AACTAAATGGCCATTTAGATCTCCTATAGACACCTTATAGCCTCTTCCTGTCTCTTCTTCTCTGCCTCGTCTAAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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