SE2950123

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_123
  • Aquilegia coerulea
  • SE2950123
  • PIF/harbinger
  • To35
  • scaffold_21:4027973-4028189
  • CTA
  • GGGTCTGTTTGATTC

Secondary structure and sequence

TSD    TIR
5'



3' 
CTA               --   -----    A   TTTACCGGTAAATTATTTTGAAGAACAAATTAGTAATTGCACAGTATAAAAAGAACAAATCTTAAAACTCTGTCAA
   GGGTCTGTTTGATTC  AAA     ATAA TTA                                                                            
   |||||||||||||||  |||     |||| |||                                                                            A
   CCCAGACAAACTAAG  CGC     AGTC AAA                                                                            
ATC               CT   CATTT    -   TGCCTATTTTGACTTTCTGTGCCCTACCATAATTACTAAATACTAGCCTCTTCTTCTGTACTTTCCTCTTTCCTCA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3