SE3020005

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_142
  • Malus domestica
  • SE3020005
  • Mutator
  • MadM5
  • MDC009423.600:23021-23207
  • ACGAAAGTG
  • AC

Secondary structure and sequence

TSD    TIR
5'



3' 
   GAAA   -    A      TTT         A     --AG    CAC        T          A      AATTTTATTTTTT     A
 AC    GTG GAGA TTTTTT   TGTGACCGG ACACG    GGTA   CACATGTT TTATATAAGT GTGGGA             AAGTT 
 ||    ||| |||| ||||||   ||||||||| |||||    ||||   |||||||| |||||||||| ||||||             ||||| T
 TG    CAC CTCT AAAAAG   ACACTGGCC TGTGC    CCAT   GTGTACAG GATATGTTTA CACTCT             TTCAA 
G  AAAG   T    -      -TC         A     CCTA    ATA        T          C      ATACACACAATTT     T
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3