SE3020014

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_151
  • Malus domestica
  • SE3020014
  • Mutator
  • MadM10
  • MDC005963.367:25534-25734
  • ATATAATAT
  • ATATAATATGGAGGAGGATTCTTTCCCCTCCTAATCTGTATTTCCTTCTTTCTTCTCTT

Secondary structure and sequence

TSD    TIR
5'



3' 
    A        G          C  C     A   G                  -   AT  -  A  GTCA   - TAAGCCACGTCAACATCTTATATTGAT
ATAT ATATGGAG AGGATTCTTT CC TCCTA TCT TATTTCCTTCTTTCTTCT CTT  TT GA CG    TGG T                           
|||| |||||||| |||||||||| || ||||| ||| |||||||||||||||||| |||  || || ||    ||| |                            
TATA TATACCTC TCCTAAGAGA GG AGGAT AGG GTAGGGGAAGGGAGGGGA GAG  AG AT GT    AAC A                           
    A        A          A  A     A   -                  A   --  T  -  ----   A AAAACAGAATAACAGAGATATTTTTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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