SE3020037

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_174
  • Malus domestica
  • SE3020037
  • Mutator
  • MadM21
  • MDC001146.369:15597-15733
  • TATATATAG
  • TATATATAGGGAACTATTATTTACACTCCAAAAATCTCATTCTGCACTCC

Secondary structure and sequence

TSD    TIR
5'



3' 
             CTA     TA                  C        TCACAAGTGTATTTTT       AT
TATATATAGGGAA   TTATT  CACTCCAAAAATCTCATT TGCACTCC                CTTTCTA  
|||||||||||||   |||||  |||||||||||||||||| ||||||||                |||||||   
ATATATATCCCTT   AATAA  GTGAGGTTTTTAGAGTAA ACGTGAGG                GAAAGAT  
             AAC     CC                  A        -------------TTT       AT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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