SE3020051

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_188
  • Malus domestica
  • SE3020051
  • Mutator
  • MadM11
  • MDC021640.126:7105-7270
  • TTTTTAAAA
  • TTTTAAAAGGGGTGTGATATCCACACACCCCTTTTTACTTCTCCCACACCTTTTTAGTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
T   T            A           CC             C          --      TCGG    CG    GGATGAA
 TTT AAAAGGGGTGTG TATCCACACAC  CTTTTTACTTCTC CACACCTTTT  TAGTTT    CCGT  GATC       
 ||| |||||||||||| |||||||||||  ||||||||||||| ||||||||||  ||||||    ||||  ||||       T
 AAA TTTTCCCCACAC ATAGGTGTGTG  GAAAAATGAAGAG GTGTGGGGAA  ATTAAA    GGCA  CTAG       
A   T            G           TA             T          CA      TACA    -A    AAGAAGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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