SE3020078

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_215
  • Malus domestica
  • SE3020078
  • Mutator
  • MadM21
  • MDC020606.309:43850-43988
  • TAATATATA
  • ATATATAGGGAACTGTTATTAGCACTCTAAAAATCCCATT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA      -      C           CTC        C    C   ACTCCTCACAAGTGTATTTTTCTT
  ATATAT AGGGAA TGTTATTAGCA   TAAAAATC CATT TAC                        
  |||||| |||||| |||||||||||   |||||||| |||| |||                         
  TATATA TCCCTT ACAATAATCGT   GTTTTTAG GTAA ACT                        
 A      A      A           AAA        A    -   GTAAAGTTTGAAAGATATTAATCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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