SE3050135

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_272
  • Malus domestica
  • SE3050135
  • PIF/harbinger
  • MadP6
  • MDC018347.452:3769-4062
  • TGG
  • T

Secondary structure and sequence

TSD    TIR
5'



3' 
            TTGAGATCCAGAATCGTTTGGTATACAGACGGGACGGGACGAAACGGAGAGGGAGCAAAGATGCCCTCAGATGGAAACAAGGAGGAAGAAGAAGGAGACGGAGAGGTTATAATTTTGTGTTCCACAGATGTGGAATGA
      TGGGTT                                                                                                                                          
      ||||||                                                                                                                                           
      TGGCAA                                                                                                                                          
ATTCCA      ACCATGCACCCTGCTCTGCTTTGCCTCACCTTGCTCCGCAAGGCAGGGTGCAAACCACGCGGATTTTGCCCACCTTGCGCGACAAGGTACTCTGCTTAAAACCCACTTAAAAACAAGGCGGAGTGGGGGACCTTACTG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3