Plant MITE

SE3020228

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_365
Malus domestica
SE3020228
Mutator
MadM11
MDC038423.4:9537-9698
ATAAGTTTG
TGGGGTGTGTTATCTACACACCKTTTTTTACTTCTCACACACRCTCTTAATTTCTGGCCATCASATC

Secondary structure and sequence

TSD TIR

5'

3'

ATAAGTT         T     A     CK                   -R   -       C  GC   CAS   AAATGAA
       TGGGGTGTG TATCT CACAC  TTTTTTACTTCTCACACAC  CTC TTAATTT TG  CAT   ATC       
       ||||||||| ||||| |||||  |||||||||||||||||||  ||| ||||||| ||  |||   |||       T
       ACCCCACAC ATAGG GTGTG  AAAAAATGAAGAGTGTGTG  GAG AATTAAA AC  GTA   TAG       
TTTGAAT         T     G     -A                   GG   T       T  -A   -AA   AAGAAAT

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE3020228

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE3020228