SE3020260

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_397
  • Malus domestica
  • SE3020260
  • Mutator
  • MadM21
  • MDC017035.462:1968-2102
  • TTTTGTAGG
  • AGGGAATTGTTATTAGCACTCCAAAAATCTTATTTGGCACTCCAAAC

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTTGT                             T            CAA  TTTCTA     ATAA
      AGGGAATTGTTATTAGCACTCCAAAAATC TATTTGGCACTC   AC      TATTT    
      ||||||||||||||||||||||||||||| ||||||||||||   ||      |||||     
      TCCCTTGATAATAATCGTGAGGTTTTTAG GTAAACCGTGAG   TG      ATAAA    
TGTTTT                             W            AAA  -TTCAC     AAGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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