SE3020262

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_399
  • Malus domestica
  • SE3020262
  • Mutator
  • MadM11
  • MDC025470.29:16947-17087
  • AAAATTTAG
  • AAATTTAGGGGTGTGCTATCCACACACCC

Secondary structure and sequence

TSD    TIR
5'



3' 
A      A        C             CAAA       G        C   TTAATTTT  TCC     TTG
 AAATTT GGGGTGTG TATCCACACACCC    TTACTTC CACACACC TTG        TG   GTTGA   
 |||||| |||||||| |||||||||||||    ||||||| |||||||| |||        ||   |||||    
 TTTAAA CCCCACAC ATAGGTGTGTGGG    AATGAAG GTGTGTGG AAC        AC   TAACT   
A      A        T             TTAA       A        -   ------CT  --T     TCC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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