SE3020293

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_430
  • Malus domestica
  • SE3020293
  • Mutator
  • MadM4
  • MDC002570.246:7587-7771
  • TACAATTAG
  • TAGGGTAATGCTAGGAGACTAAATTTGGAGACAAAATTTACAAATTAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TACAAT             -              GA          A         ----     TGAAAATTGATGATTAGATTATTACTTAAG
      TAGGGTAATGCTA GGAGACTAAATTTG  GACAAAATTT CAAATTAAA    CGACA                              
      ||||||||||||| ||||||||||||||  |||||||||| |||||||||    |||||                               
      ATCCCATTACGAT CCTCTGATTTAAAC  TTGTTTTAAA GTTTAGTTT    CACAG                              
ATTAAC             T              AT          C         AATA     TGGTTATCTTTTATTTGTGCAAATAGTTGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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