SE3020320

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_457
  • Malus domestica
  • SE3020320
  • Mutator
  • MadM49
  • MDC025415.63:746-899
  • TTGTTCTTT
  • AAATGCTACTCTTACCACCTAGTTATACCATCTCTCTAATAGAGATAGAACCCAC

Secondary structure and sequence

TSD    TIR
5'



3' 
TTGTTCTTTCAC         T     C     ------------G     C             G  A   ----AA  C  AT
            AAATGCTAC CTTAC ACCTA             TTATA CATCTCTCTAATA AG TAG      CC AC  
            ||||||||| ||||| |||||             ||||| ||||||||||||| || |||      || ||   
            TTTATGATG GAATG TGGAT             AATAT GTAGAGAGATTAT TC ATT      GG TG  
TTTCTTGTTCTC         T     A     AAACATCGTAGTA     A             G  A   CCAGAC  T  TG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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