SE3020337

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_474
  • Malus domestica
  • SE3020337
  • Mutator
  • MadM21
  • MDC019153.54:140-276
  • TAACTTTAG
  • TTAGGGAATTGTTATTAGCACTCCAAAAATCTCATTTGGCACTCC

Secondary structure and sequence

TSD    TIR
5'



3' 
TAACT                    C         C      G       AAA   TCTATAATTAGAA
     TTAGGGAATTGTTATTAGCA TCCAAAAAT TCATTT GCACTCC   CTT             
     |||||||||||||||||||| ||||||||| |||||| |||||||   |||             A
     AATCCCTTGACAATAATCGT AGGTTTTTA AGTAAG TGTGAGG   GTG             
ATTTC                    A         A      A       --A   TTCACATAAAAAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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