SE3020374

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_511
  • Malus domestica
  • SE3020374
  • Mutator
  • MadM79
  • MDC021726.395:15346-15533
  • ATAATTTGA
  • TAATTTGAGAGAAAAGCTAATGAGACTCTTTCAAAGTGAGATTTTTTATGGACTCTCTGTCACCTCACAYTTTAACGT

Secondary structure and sequence

TSD    TIR
5'



3' 
A   T   A      A C        CTC     -     A           G     C    AC    -CAY   AA   TAATTA     CTA
 TAA TTG GAGAAA G TAATGAGA   TTTCA AAGTG GATTTTTTATG ACTCT TGTC  CTCA    TTT  CGT      TTGTG   
 ||| ||| |||||| | ||||||||   ||||| ||||| ||||||||||| ||||| ||||  ||||    |||  |||      |||||   A
 GTT AAT CTCTTT C ATTACTTT   AGAGT TTCAC CTGAGAGATAT TGAGA ACGG  GAGT    AAA  GCG      AATAC   
A   T   A      A A        TAA     G     C           -     A    CA    ATCA   CC   TTACAA     TAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3