SE3020385

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_522
  • Malus domestica
  • SE3020385
  • Mutator
  • MadM15
  • MDC002097.315:8235-8449
  • ATCTTCAGA
  • TCTTCAGAGGATTTGGATCCTCTCCTGAGCAAGGGAGACGGATCCTCTTGACCCAAATATACGGGCCGTTGGATTGATCCAACGGCTACAA

Secondary structure and sequence

TSD    TIR
5'



3' 
A   TC   -                                 AT         C                     --     C           -ACAGAA   CCCTC
 TCT  AGA GGATTTGGATCCTCTCCTGAGCAAGGGAGACGG  CCTCTTGAC CAAATATACGGGCCGTTGGAT  TGATC AACGGCTACAA       GAC     
 |||  ||| |||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||  ||||| |||||||||||       |||      
 AGA  TCT CCTAAACCTAGGAGAGGACTCGTTTCCTCTGCC  GGAGAATTG GTTTATGTGTCTGGCAATCTA  ACTAG TTGCCGATGTT       TTG     
    CT   A                                 GC         A                     AA     A           AATAATA   AAAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3