SE3020414

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_551
  • Malus domestica
  • SE3020414
  • Mutator
  • MadM4
  • MDC009247.164:2466-2653
  • CAACATAAA
  • GGGTAATGCTAGGAAGACCAAATTTGGAGACTAATTTTATAAACTAAATGATGTG

Secondary structure and sequence

TSD    TIR
5'



3' 
CAACATAAA      T           C       GA   -TAA    AT        T      ---------------------------  ACCAATAAGAATAA
         GGGTAA GCTAGGAAGAC AAATTTG  GAC    TTTT  AAACTAAA GATGTG                           TC              
         |||||| ||||||||||| |||||||  |||    ||||  |||||||| ||||||                           ||               
         CTCATT CGATCCTTCTG TTTAAAT  CTG    AAAA  TTTGATTT CTGTAC                           TG              
AAACACAAC      T           A       AC   TTTC    CT        C      TTTCAACTACTAACCAAATAATGAATA  TAACTAATTGCACG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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