SE3020418

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_555
  • Malus domestica
  • SE3020418
  • Mutator
  • MadM21
  • MDC010275.209:14056-14192
  • TAAAATAAG
  • AGGGAATTGTTATTGGCACTCCAAATTTCTCATTCTACACTCC

Secondary structure and sequence

TSD    TIR
5'



3' 
TAAAATA      T                  TT                AAA   TCTATATTTAGAA
       AGGGAA TGTTATTGGCACTCCAAA  TCTCATTCTACACTCC   CTT             
       |||||| ||||||||||||||||||  ||||||||||||||||   |||             A
       TCCCTT ACAATAACCGTGAGGTTT  AGAGTAAGATGTGAGG   GTG             
AATAAAA      C                  TT                --A   TTCACATAAAAAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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