SE3020435

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_572
  • Malus domestica
  • SE3020435
  • Mutator
  • MadM8
  • MDC021740.214:12857-13033
  • TAATACAAG
  • TACAAGGGTAATGTTAGGAAATCAAAATTTTAAATCAAATWATGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TAA   -               - A      -A             WA   GTCACAAATAGGAAATAAGC     AATRAACGTTTAAATAATAATACA
   TAC AAGGGTAATGTTAGG A ATCAAA  TTTTAAATCAAAT  TGT                    ACGTT                        
   ||| ||||||||||||||| | ||||||  |||||||||||||  |||                    |||||                        A
   ATG TTCCTATTACGATCC T TGGTTT  AAAATTTGGTTTA  ACG                    TTGGT                        
 AC   A               C C      AA             -A   -------------------T     TTACTATACCAATTAACAACTACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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