SE3020447

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_584
  • Malus domestica
  • SE3020447
  • Mutator
  • MadM21
  • MDC000083.452:5503-5641
  • TTATTTTAA
  • TAAGAGAATTGTTATTGGCACTCCAAAATTCTCATTTTGCACTTCATAC

Secondary structure and sequence

TSD    TIR
5'



3' 
TTATTT    A                       TTC  A           A   TTTC       AGGA
      TAAG GAATTGTTATTGGCACTCCAAAA   TC TTTTGCACTTC TAC    TATATTT    
      |||| |||||||||||||||||||||||   || ||||||||||| |||    |||||||     
      ATTC CTTAACAATAACTGTGAGGTTTT   AG AAAACGTGAGG GTG    GTATAAA    
AATTTT    C                       TAT  C           A   -TTT       AAGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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