SE3020448

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_585
  • Malus domestica
  • SE3020448
  • Mutator
  • MadM9
  • MDC022773.244:8697-8926
  • GATTAAATA
  • ATTAAATAGAATGA

Secondary structure and sequence

TSD    TIR
5'



3' 
G   A   A         TTCTCTTTGTGAGAATTTTGAGAATCCTCAAATCGTGTTCGTTCATCGTACATCGTGCGACCATTTTTCGTCAAGTACTATTCATATTTAATTTTAA
 ATT AAT GAATGAGGA                                                                                                 
 ||| ||| |||||||||                                                                                                  
 TAA TTA CTTACTCCT                                                                                                 
A   A   G         AGGAGAGGCCTAGGAGAAACACTCCTAGGACCCCTAGGAATTTATCGCAGGCAAATGACATGTAGCACACCAGTCTTTAGTAAAATTTATGAAAATA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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