SE3020452

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_589
  • Malus domestica
  • SE3020452
  • Mutator
  • MadM15
  • MDC006940.368:33249-33451
  • TGATCGATG
  • ATCGATGGGACATGGATCCTCTTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TG      -                      CTAATTATCCTAATCCTAGGGATCCATCAATCCGGACTATTGAAATTTGATCAAACGGCTACAAATAGAGG
  ATCGAT GGGACATGGATCCTCTTCGGAT                                                                       
  |||||| ||||||||||||||||||||||                                                                       C
  TAGCTA TCCTGTACCTAGGAGAGGATTA                                                                       
 G      G                      GTATCCCTAGGTAGTTAAGCTCGTCAACTTTAAACTAGGTTGTCAATTTCAATAATATTGAAAATTTTACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3