SE3020486

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_623
  • Malus domestica
  • SE3020486
  • Mutator
  • MadM96
  • MDC007517.244:826-1040
  • CAACTGGTA
  • ACTGGTAGGGAAGAGATCTCTTTCGGATTTCTTCCACCAAAGTCTCATAATCAATTAATTCGGGCTCTTGAAATTGATCAAACGGCTA

Secondary structure and sequence

TSD    TIR
5'



3' 
CA      -A                C                    T                   C CT       -   C   C     -CAAACATGG    CTT
  ACTGGT  GGGAAGAGATCTCTTT GGATTTCTTCCACCAAAGTC CATAATCAATTAATTCGGG T  TGAAATT GAT AAA GGCTA          AGCT   
  ||||||  |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |  ||||||| ||| ||| |||||          ||||   T
  TGGTCA  CCCTTCTCTAGGGAAA CCTAGAGAGGGTGGTTTCGG GTGTTAGTTAATTAGGCCT A  ACTTTAA CTA TTT CCGAT          TTGA   
 A      AC                A                    T                   A AT       A   A   A     TTTAATAATA    AAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3