SE3020548

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_685
  • Malus domestica
  • SE3020548
  • Mutator
  • MadM4
  • MDC018640.572:19314-19489
  • TTTTATATT
  • GTAATGCTAGAGATACTAAATTTGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTTATATTGA             T           AG    AATTTTGTAAATTAAATGACATTTAAGTTGATGATTAAATTATTAC
           GTAATGCTAGAGA ACTAAATTTGT  ACAA                                              
           ||||||||||||| |||||||||||  ||||                                              T
           CATTATGATCTCT TGATTTAAACA  TTAA                                              
TTATATTTTCC             C           -C    TTTACTACACAGTAATTATCCTTTACTAGTGCAAATAGTTACGAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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