SE3020553

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_690
  • Malus domestica
  • SE3020553
  • Mutator
  • MadM21
  • MDC020873.284:1875-2017
  • ATATATATA
  • ATATATATATAGGGAATTGTTATTGGCACTTCAAAAATCTCATTCTACACTCCAAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
                T        GC   T             C    C  CAA  TTTCTA     GAAA
ATATATATATAGGGAA TGTTATTG  ACT CAAAAATCTCATT TACA TC   AT      TATTT    
|||||||||||||||| ||||||||  ||| ||||||||||||| |||| ||   ||      |||||     
TATATATATATCCCTT ACAATAAC  TGA GTTTTTAGAGTAA ATGT AG   TG      ATAAA    
                C        YR   R             T    A  TAG  -TTCAC     AAGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3