SE3020566

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_703
  • Malus domestica
  • SE3020566
  • Mutator
  • MadM15
  • MDC009282.275:2024-2240
  • CATATATAT
  • TATATATGGAAAGGGATCCTCTCCGGATCCCTTCCTCTTAATCCACCAAATTAGGGGATTTGTGCCGTTGAAATTTAATCCAACGGCTGAA

Secondary structure and sequence

TSD    TIR
5'



3' 
CA         -             C                                                     A           --   GTTATTATA    T
  TATATATGG AAAGGGATCCTCT CGGATCCCTTCCTCTTAATCCACCAAATTAGGGGATTTGTGCCGTTGAAATTT ATCCAACGGCT  GAA         ACTT 
  ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||         |||| T
  ATATATACC TTTCCCTAGGAGA GCTTAGGGAAGGAGGATTAGGTGGTTTAGTTCCCTAGGCACGGCAACTTTAAA TAGGTTGCCGA  CTT         TGAA 
 C         C             A                                                     C           TG   GTCTCTGGG    A
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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