SE3020601

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_738
  • Malus domestica
  • SE3020601
  • Mutator
  • MadM8
  • MDC013869.322:6945-7166
  • TAATAAAAT
  • G

Secondary structure and sequence

TSD    TIR
5'



3' 
TAATAAAAT  A    GCTAGGGAGACCAAAATTTTTAAACCAAATTGCAAACCAAATGATGTGTCACCAATAAGAAACAAGAACGTTAATCGACACTTAGTTAATAATCCAATC
         GG TAAT                                                                                                   
         || ||||                                                                                                    
         AT ATAC                                                                                                   
       TA  -    AGATAGAATTATTAAAAAGTATATATAAAATAATCCCATTACGATCCCTCAAGTTTAATAAATTTGGGTTAAACGTTTGGTTTACTACACCAACATCTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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