SE3020605

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_742
  • Malus domestica
  • SE3020605
  • Mutator
  • MadM25
  • MDC012748.461:357-528
  • TTTTTATAA
  • TTATAAAGGAAAACTAATGAAAAGGGCTTG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTT       ---    AAC          GG    -----   ACTTTAAGTTTTAACAGTAAGGACAAAATAAAGGGTAAAGTGAATAG
   TTATAAA   GGAA   TAATGAAAAG  CTTG     AAA                                               
   |||||||   ||||   ||||||||||  ||||     |||                                               T
   AATATTT   CCTT   ATTGCTTTTT  GGAC     CAA                                               
          TTC    GAA          GA    CATAA   GTGAAATTGCTTTTTGGTGTAAAAATGTGATTTTTCAGTTAGGACCA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3