SE3020637

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_774
  • Malus domestica
  • SE3020637
  • Mutator
  • MadM110
  • MDC004699.467:35084-35250
  • TAAATTTAG
  • TAAATTTAGGGAGATTATATTCACACACCCCAAATTACTTCTCTCACACCTTTTTAATTTTTTAATATTTTTCTATCA

Secondary structure and sequence

TSD    TIR
5'



3' 
                             C                                          -- -     AGTG
TAAATTTAGGGAGATTATATTCACACACC CAAATTACTTCTCTCACACCTTTTTAATTTTTTAATATTTTT  C TATCA    
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  | |||||     
ATTTAAATCTCTTTAATATAAGTGTGTGG GTTTAATGAAGAGGGTGTGGAAAAATTAAAAAATTATAAAAG  G GTGGT    
                             A                                          AT T     GATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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