SE3020655

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_792
  • Malus domestica
  • SE3020655
  • Mutator
  • MadM11
  • MDC015291.258:41182-41341
  • TATAAAATG
  • GGATAGTGCTATTCACACACCCATTTTTACCTCCCACACACCTTTGTTAATTTTTGGCCATTGATC

Secondary structure and sequence

TSD    TIR
5'



3' 
TATAAAAT      T                       C  C     A       T           A   -   TTCCAT
        GGATAG GCTATTCACACACCCATTTTTAC TC CACAC CCTTTGT AATTTTTGGCC TTG ATC      
        |||||| ||||||||||||||||||||||| || ||||| ||||||| ||||||||||| ||| |||       
        CCTATC CGATAGGTGTGTGGGTAAAAATG AG GTGTG GGGAGCG TTAAAGGTCGG AAC TAG      
TAAAATAT      T                       A  A     G       -           C   C   CTTACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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