SE3020657

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_794
  • Malus domestica
  • SE3020657
  • Mutator
  • MadM18
  • MDC004172.119:28457-28645
  • TTTACAGTT
  • GAGAAATGCTAAGAGGATTCTCT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTACAGTT               G       AAAAAAAGAA      -    A           C    ------------      -G  A       TT
         GAGAAATGCTAAGAG ATTCTCT          ACTTTC ATGA CTCTTTGGCAC TCGT            GTTTTT  GC CAATATT  
         ||||||||||||||| |||||||          |||||| |||| ||||||||||| ||||            ||||||  || |||||||   
         CTCTTTACGATTCTC TGAGAGA          TGAGAG TACT GAGAGACTGTG AGTA            TAAAAG  TG GTTGTAA  
TTGACATTT               A       GTTCTCATTC      A    A           A    TCAAATTGCAGT      GA  -       TA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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