SE3020685

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_822
  • Malus domestica
  • SE3020685
  • Mutator
  • MadM114
  • MDC022167.149:5306-5521
  • CATTACATG
  • ATGGAACCGAATCCCCTCTGGATCCTT

Secondary structure and sequence

TSD    TIR
5'



3' 
CATTAC    --A    AA      C         GTAAACTA          C            A C   T               T       TTATTATAA   TA
      ATGG   ACCG  TCCCCT TGGATCCTT        AGCCTCTTGA CAAGGGATCTGG C GTT GAAATTTGATTCAAC ACTACAA         CTT  
      ||||   ||||  |||||| |||||||||        |||||||||| |||||||||||| | ||| ||||||||||||||| |||||||         |||   
      TACC   TGGC  AGGGGA ACCTGGGAA        TCGGAGAACT GTTCCCTAGGCC G CAA CTTTAAACTAGGTTG TGATGTT         GAG  
 TACAT    CCA    CC      A         ACTTTAAC          A            C T   -               T       TATCCCCCG   CG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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