SE3020690

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_827
  • Malus domestica
  • SE3020690
  • Mutator
  • MadM11
  • MDC015084.371:755-918
  • TAAAAATAG
  • TAGGGATGTGATATCCACACACCCCTTTTTACTTCTCTCACACCCTTTTAATTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TAAAAA          A                                -    -       -------   G CGTCYYATCGGAT
      TAGGGATGTG TATCCACACACCCCTTTTTACTTCTCTCACAC CCTT TTAATTT       TCG C             
      |||||||||| |||||||||||||||||||||||||||||||| |||| |||||||       ||| |              
      ATCCCTACAC ATAGGTGTGTGGGGAAAAATGAAGAGGGTGTG GGAA AATTAAA       AAC T             
ATAAAA          G                                A    C       AACAGTA   - AGAAGAAGTTAAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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