SE3020724

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_861
  • Malus domestica
  • SE3020724
  • Mutator
  • MadM4
  • MDC040048.9:2986-3173
  • TTTCTTATT
  • GGGTAATGTTAGGGAGATTAAATTTGAAGACAAAATT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTCTTATT                          A   -C      TTYA        G  -   GGAAGTTGATGATTGGTTTATTACTTGAGC
         GGGTAATGTTAGGGAGATTAAATTTG AGA  AAAATT    AAACTAAA GA CAT                              
         |||||||||||||||||||||||||| |||  ||||||    |||||||| || |||                               
         CCCATTACGATCCTTTTGATTTAAAC TCT  TTTTAA    TTTGATTT CT CAC                              
TTATTCTTT                          A   AT      --TG        A  A   AGTGATTATCCTTACTCGTGCAAATAGTTG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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