SE3020729

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_866
  • Malus domestica
  • SE3020729
  • Mutator
  • MadM119
  • MDC034571.5:521-708
  • AAAACAAAA
  • GGGTAATGATATGAG

Secondary structure and sequence

TSD    TIR
5'



3' 
AAAACAAAA    A   ATA    ACAC    G       -              -C         ----------------TCAC   TAGGAAATAAAAATG
         GGGT ATG   TGAG    CAAA TTTTTAA TCAAATTTACAAAT  AATGATGTG                    TAA               
         |||| |||   ||||    |||| ||||||| ||||||||||||||  |||||||||                    |||                
         CCTA TAC   ATTC    GTTT AAAAATT GGTTTAAATGTTTG  TTACTACAT                    ATG               
AAAACAAAA    G   --A    CCTA    A       T              AT         CAATAACTACTAATCTAATA   AATTCATGACTAATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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