SE3020735

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_872
  • Malus domestica
  • SE3020735
  • Mutator
  • MadM11
  • MDC005099.180:4858-5018
  • ATTACTAGG
  • TAGGGGTGTGCTATCCACACACCCCAAATTACTTCTCACACACCCTTGTTAATTT

Secondary structure and sequence

TSD    TIR
5'



3' 
ATTAC          C               AA                   G       CTAT      -   TTCTTCA
     TAGGGGTGTG TATCCACACACCCCA  TTACTTCTCACACACCCTT TTAATTT    CCGTTG ATC       
     |||||||||| |||||||||||||||  ||||||||||||||||||| |||||||    |||||| |||       A
     ATCCCCACAC ATAGGTGTGTGGGGT  AATGAAGAGTGTGTGGGAA AATTAAA    GGCAGC TAG       
TCATT          T               AA                   -       AGCC      C   CCTACTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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