SE3050774

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_911
  • Malus domestica
  • SE3050774
  • PIF/harbinger
  • MadP24
  • MDC002471.234:20281-20567
  • TAA
  • AGGCCTTCTGCAATAGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TA            ATA  CCGAAAA    T           ------    T TTGAATTCATATAAGAATCATWCATCTATAGTGGGCCYAATTTTGAGTGTGACACCAATTTATTGAATCAATGAGTTCAATATATTAGATTCATG
  AGGCCTTCTGCA   GG       AAGT AGTGTGATACT      AATA A                                                                                               
  ||||||||||||   ||       |||| |||||||||||      |||| |                                                                                               A
  TCCGGAAGGTGT   CC       TTCA TCACACTATGA      GTCC T                                                                                               
AA            -CA  ----AAG    C           ATATAT    - TAATCTGTAGGACTCAAATTAAAGATATTGTGATGACGYCATTATCACACTTAAGTTATATAACCATGGTGTGAGTACTCAAACTATATAACCTG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3