SE3020788

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_925
  • Malus domestica
  • SE3020788
  • Mutator
  • MadM11
  • MDC020023.63:238-380
  • ATAATTTAG
  • GGGGTGTGATATTCACACACCCC

Secondary structure and sequence

TSD    TIR
5'



3' 
ATAATTTA        A              ATTTTACTTATCACACACCTTTT       C G    CG    GAATGAA
        GGGGTGTG TATTCACACACCCC                       TAATTTT G CCGT  GATC       
        |||||||| ||||||||||||||                       ||||||| | ||||  ||||       T
        CCCCACAC ATAGGTGTGTGGGG                       ATTAAAA C GGCA  CTAG       
ATTTAATA        G              -------------------AACT       A A    -A    AAGAAGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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