SE3020796

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_933
  • Malus domestica
  • SE3020796
  • Mutator
  • MadM15
  • MDC015923.158:2382-2605
  • CTCATCAGT
  • G

Secondary structure and sequence

TSD    TIR
5'



3' 
     CTCATCA       T   TCCTTTTCGGATCCCTTTCCACCTAAGCCAACTGAGCCAATTGAGCACAAAATCCAGACCCTTGAAATTTGATCTAACGACTAAAAACAGGG
            GTGGAAA GGA                                                                                            
            ||||||| |||                                                                                             
            TTCCCTA GGT                                                                                            
TGACTACTCCCT       -   CTCTCACCTAGGGAAGGTGGACTCGGTTGACTCGTGTTTTTCGGGAACTTTAAACTAGGTTATCGATTTCAATAATATTGAAAATTACCCGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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