SE3020803

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_940
  • Malus domestica
  • SE3020803
  • Mutator
  • MadM21
  • MDC011173.243:6924-7060
  • TTAATCTAG
  • AGGAAATTGTTATTAGCACTCTAAAAATCTCATTTGTCATTCCAAAC

Secondary structure and sequence

TSD    TIR
5'



3' 
 TTAATCT     A              C              GT      AA  TTTCTATAATTATA
        AGGAA TTGTTATTAGCACT TAAAAATCTCATTT  CATTCC  AC              
        ||||| |||||||||||||| ||||||||||||||  ||||||  ||              A
        TCCTT AACAATAATCGTGA GTTTTTAGAGTAAG  GTGAGG  TG              
ATCTAATT     -              A              AT      AG  TTCACATAAAAAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3