SE3020808

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_945
  • Malus domestica
  • SE3020808
  • Mutator
  • MadM21
  • MDC013302.475:2952-3088
  • TTGTAATAG
  • TAATAGGGAATTGTTATTGGCACTCTAAAAATCTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TTG  AT        G                      --AT    CACTACAAATTTTCTATAATTAG
   TA  AGGGAATT TTATTGGCACTCTAAAAATCTC    TTTG                       
   ||  |||||||| ||||||||||||||||||||||    ||||                       A
   AT  TCCCTTGA AATAATCGTGAGATTTTTAGAG    ATAT                       
ATA  GT        A                      AAAG    GAGGAGTATTCATATAAAAAGAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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