SE3020811

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_948
  • Malus domestica
  • SE3020811
  • Mutator
  • MadM85
  • MDC021685.130:21332-21498
  • ATAATTTAT
  • ATAATTTATGGGAGGCTACAATAGT

Secondary structure and sequence

TSD    TIR
5'



3' 
    T       --AG         G TA       TTT    C    A - ATCTGACGGTTAATATATATACATATGAATATATGT
ATAA TTATGGG    GCTACAATA T  CATGTGT   TATA AATC T C                                    
|||| |||||||    ||||||||| |  |||||||   |||| |||| | |                                    A
TATT AATACCT    CGATGTTAT A  ATGTACA   TAAA TTAT G T                                    
    T       AAAA         G --       ---    -    - G AGTGGTAGGGTCGATAGTCTACCACTAACATAATTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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